Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 CYP4F23P-201ENST00000593402 1579 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 REXO1L6P-201ENST00000603433 1515 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 FAM58BP-201ENST00000439056 645 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AL591846.1-201ENST00000451736 433 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 RNMTL1P1-201ENST00000454103 560 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AC006122.1-201ENST00000493323 440 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AL160314.3-201ENST00000556041 767 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AC009884.2-201ENST00000603110 324 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AC144522.1-201ENST00000625111 1658 ntBASIC14.77□□□□□ -0.04
HLA-DQB2P05538 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DQB2P05538 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 GRK6P1-201ENST00000400595 1711 ntBASIC14.77□□□□□ -0.05
HLA-DQB2P05538 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DQB2P05538 AC018735.1-201ENST00000437208 1502 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms