Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC097065.1-201ENST00000425737 517 ntBASIC15.73■□□□□ 0.11
CHRNA1P02708 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.73■□□□□ 0.11
CHRNA1P02708 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC007952.4-201ENST00000573866 637 ntBASIC15.73■□□□□ 0.11
CHRNA1P02708 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 AC006372.4-201ENST00000624122 1543 ntBASIC15.73■□□□□ 0.11
CHRNA1P02708 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.72■□□□□ 0.11
CHRNA1P02708 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 AC092638.2-201ENST00000441105 947 ntBASIC15.72■□□□□ 0.11
CHRNA1P02708 ERP29P1-201ENST00000442902 706 ntBASIC15.72■□□□□ 0.11
CHRNA1P02708 AC004837.1-201ENST00000446267 564 ntBASIC15.72■□□□□ 0.11
CHRNA1P02708 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.72■□□□□ 0.11
CHRNA1P02708 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.72■□□□□ 0.11
CHRNA1P02708 RN7SL665P-201ENST00000578793 300 ntBASIC15.72■□□□□ 0.11
CHRNA1P02708 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.72■□□□□ 0.11
CHRNA1P02708 MIR2392-201ENST00000584881 84 ntBASIC15.72■□□□□ 0.11
CHRNA1P02708 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.72■□□□□ 0.11
CHRNA1P02708 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CHRNA1P02708 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHRNA1P02708 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CHRNA1P02708 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHRNA1P02708 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.72■□□□□ 0.11
CHRNA1P02708 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRNA1P02708 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA1P02708 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA1P02708 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CHRNA1P02708 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 AL357563.1-201ENST00000404728 395 ntBASIC15.71■□□□□ 0.11
CHRNA1P02708 DPY19L2P5-201ENST00000456300 331 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms