Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AC092183.1-201ENST00000469884 875 ntBASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 MIR6074-201ENST00000612054 107 ntBASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AC092902.6-201ENST00000641783 218 ntBASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 AC027369.3-201ENST00000530465 3707 ntBASIC13.97□□□□□ -0.17
LRCH1Q9Y2L9 PCDHA6-201ENST00000378126 3267 ntBASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AGGF1P10-201ENST00000635005 2191 ntBASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRCH1Q9Y2L9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRCH1Q9Y2L9 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRCH1Q9Y2L9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LRCH1Q9Y2L9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AZGP1P1-201ENST00000411909 902 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms