Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 REXO1L2P-201ENST00000425429 2069 ntBASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 AL512599.1-201ENST00000430724 685 ntBASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 AC010900.1-201ENST00000449849 1296 ntBASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZC3H4Q9UPT8 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 LINC00265-2P-201ENST00000413372 782 ntBASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 NDUFB10P1-201ENST00000567319 521 ntBASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZC3H4Q9UPT8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 AC106827.1-201ENST00000366454 431 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 PSAT1P2-201ENST00000426107 972 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 RN7SL147P-201ENST00000487345 298 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms