Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 FGD5P1-202ENST00000614866 2498 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 LINC02228-204ENST00000642115 2962 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 KRT8P19-201ENST00000551916 1455 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC007274.2-201ENST00000421675 662 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AL353637.1-201ENST00000451571 732 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC084346.2-201ENST00000607097 949 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AF254983.2-201ENST00000612331 135 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AL353770.1-201ENST00000614915 403 ntBASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CLCF1Q9UBD9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms