Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AC004899.1-201ENST00000424687 1714 ntBASIC15.55■□□□□ 0.08
CISHQ9NSE2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AC108725.1-201ENST00000495472 409 ntBASIC15.55■□□□□ 0.08
CISHQ9NSE2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AC104506.1-201ENST00000609247 429 ntBASIC15.55■□□□□ 0.08
CISHQ9NSE2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.55■□□□□ 0.08
CISHQ9NSE2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AC097376.2-205ENST00000610159 5334 ntBASIC15.55■□□□□ 0.08
CISHQ9NSE2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 VDAC1P1-201ENST00000439229 848 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 AC244107.1-201ENST00000442033 332 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 ST13P19-201ENST00000442505 1124 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 AC104306.2-201ENST00000451877 341 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 PFN1P12-201ENST00000455938 534 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 SCARNA21-201ENST00000517026 139 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 RN7SL219P-201ENST00000582872 296 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 AC008805.1-201ENST00000590892 364 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 AL008638.5-201ENST00000623814 1298 ntBASIC15.54■□□□□ 0.08
CISHQ9NSE2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CISHQ9NSE2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.54■□□□□ 0.08
CISHQ9NSE2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CICP16-201ENST00000502609 2813 ntBASIC15.53■□□□□ 0.08
CISHQ9NSE2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 AC016397.2-201ENST00000624848 1985 ntBASIC15.53■□□□□ 0.08
CISHQ9NSE2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CISHQ9NSE2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.53■□□□□ 0.08
CISHQ9NSE2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms