Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 SLC25A24P2-201ENST00000415059 510 ntBASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AL023775.1-201ENST00000454907 1746 ntBASIC17.43■□□□□ 0.38
DDX11Q96FC9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AGGF1P1-201ENST00000509500 2073 ntBASIC17.43■□□□□ 0.38
DDX11Q96FC9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 SBF1P1-201ENST00000444527 5631 ntBASIC17.42■□□□□ 0.38
DDX11Q96FC9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 AC079178.1-201ENST00000420915 656 ntBASIC17.42■□□□□ 0.38
DDX11Q96FC9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 TPT1P11-201ENST00000458482 498 ntBASIC17.42■□□□□ 0.38
DDX11Q96FC9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 AC244157.2-201ENST00000616239 1006 ntBASIC17.42■□□□□ 0.38
DDX11Q96FC9 AL928921.2-201ENST00000641325 2442 ntBASIC17.42■□□□□ 0.38
DDX11Q96FC9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX11Q96FC9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX11Q96FC9 INE2-201ENST00000630399 1874 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 GRK6P1-201ENST00000400595 1711 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 HSPA7-201ENST00000445535 1927 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 MIR663B-201ENST00000408361 115 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 FNTAP2-201ENST00000430308 634 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 PPY2P-201ENST00000582808 702 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 AC020914.3-201ENST00000594712 304 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 OR10B1P-201ENST00000601666 907 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms