Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC4Q92889 KRT8P24-201ENST00000560290 1559 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 AC092364.2-202ENST00000597012 1073 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC4Q92889 AC005014.1-201ENST00000432006 2976 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 CICP20-201ENST00000443330 2801 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC4Q92889 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC4Q92889 PEG13-201ENST00000631594 5667 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ERCC4Q92889 AL138725.1-201ENST00000407347 1314 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 AGAP10P-201ENST00000454844 2418 ntBASIC16.66■□□□□ 0.26
ERCC4Q92889 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC4Q92889 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC4Q92889 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC4Q92889 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
ERCC4Q92889 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERCC4Q92889 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.65■□□□□ 0.26
ERCC4Q92889 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 ACTBP8-201ENST00000403258 1108 ntBASIC16.65■□□□□ 0.26
ERCC4Q92889 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERCC4Q92889 AC131206.1-201ENST00000538078 1211 ntBASIC16.65■□□□□ 0.26
ERCC4Q92889 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ERCC4Q92889 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC4Q92889 AC133539.2-201ENST00000604757 467 ntBASIC16.65■□□□□ 0.26
ERCC4Q92889 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 AP005019.2-201ENST00000615104 511 ntBASIC16.65■□□□□ 0.26
ERCC4Q92889 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC4Q92889 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ERCC4Q92889 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC4Q92889 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 MRPL37P1-201ENST00000592451 1337 ntBASIC16.65■□□□□ 0.26
ERCC4Q92889 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC4Q92889 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC4Q92889 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
ERCC4Q92889 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 AC023794.5-201ENST00000564380 2157 ntBASIC16.64■□□□□ 0.25
ERCC4Q92889 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC4Q92889 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ERCC4Q92889 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC4Q92889 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC4Q92889 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC4Q92889 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC4Q92889 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 AC093433.1-201ENST00000458048 571 ntBASIC16.64■□□□□ 0.25
ERCC4Q92889 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC4Q92889 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC4Q92889 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC4Q92889 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms