Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC107918.4-201ENST00000641966 3141 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC005229.1-201ENST00000392885 409 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AL355864.2-201ENST00000447420 863 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 RN7SL692P-201ENST00000464677 288 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FTLP10-202ENST00000505798 471 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 USP32P1-208ENST00000506594 1164 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC015936.2-201ENST00000593177 259 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 AC132938.4-201ENST00000623835 848 ntBASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF439Q8NDP4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms