Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 KLF2P1-201ENST00000447438 1042 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AC132872.1-201ENST00000566986 1195 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 TUBB1P2-201ENST00000422712 1306 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 TUBB1P1-201ENST00000503144 1300 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 AL590440.2-201ENST00000641973 1595 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 KHSRPP1-201ENST00000427983 1768 ntBASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC82Q8N4S0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC82Q8N4S0 AC244394.1-201ENST00000435000 1665 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 KRT8P28-201ENST00000433288 1390 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 HSPB1P2-201ENST00000448722 546 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 TPT1P11-201ENST00000458482 498 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AC104982.3-201ENST00000581995 514 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 RN7SL219P-201ENST00000582872 296 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 AC009955.4-201ENST00000597192 544 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 SBF1P1-201ENST00000444527 5631 ntBASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC82Q8N4S0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 MIR4538-201ENST00000581377 78 ntBASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC82Q8N4S0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms