Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 EEF1DP4-201ENST00000446006 880 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 CR383656.12-201ENST00000549567 513 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AL138828.2-201ENST00000615812 383 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 SPDYE12P-201ENST00000618416 771 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 BTBD7P1-201ENST00000447253 1453 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AC012508.2-201ENST00000567613 1472 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 AC019294.4-201ENST00000561777 2905 ntBASIC12.89□□□□□ -0.35
C11orf88Q6PI97 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC005034.1-201ENST00000426657 489 ntBASIC12.88□□□□□ -0.35
C11orf88Q6PI97 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 CRB3P1-201ENST00000449338 276 ntBASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 ZNF890P-202ENST00000530367 1156 ntBASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC105021.1-202ENST00000570572 669 ntBASIC12.88□□□□□ -0.35
C11orf88Q6PI97 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AL589739.1-201ENST00000607720 493 ntBASIC12.88□□□□□ -0.35
C11orf88Q6PI97 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms