Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CA5BP1-205ENST00000435806 1064 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 KRT18P62-201ENST00000446618 1287 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 KLF17P1-201ENST00000547105 1126 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 KRT127P-201ENST00000547183 433 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 AC106785.2-201ENST00000564385 1319 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 RN7SL838P-201ENST00000481676 295 ntBASIC13.91□□□□□ -0.18
RIF1Q5UIP0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIF1Q5UIP0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 PPP1R2P10-201ENST00000393023 595 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC103563.1-201ENST00000429316 123 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC132812.1-201ENST00000583145 892 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 ABCD1P4-201ENST00000399687 604 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC133141.1-201ENST00000443015 339 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 RN7SL87P-201ENST00000497657 288 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 AC093700.1-201ENST00000503348 717 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 RN7SKP155-201ENST00000516031 288 ntBASIC13.9□□□□□ -0.18
RIF1Q5UIP0 PPY-202ENST00000587006 431 ntTSL 3 BASIC13.9□□□□□ -0.18
RIF1Q5UIP0 MIR6819-201ENST00000622122 61 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms