Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 AL157823.1-201ENST00000403727 628 ntBASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 MAGEA7P-201ENST00000436482 942 ntBASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 NALT1-202ENST00000450304 437 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 KRT18P15-201ENST00000458108 1291 ntBASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 AC138627.1-201ENST00000641127 1257 ntBASIC9.45□□□□□ -0.9
VPS13DQ5THJ4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC008494.1-201ENST00000497612 796 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC006986.1-201ENST00000612764 241 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GALP-202ENST00000440823 889 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 TREX1-203ENST00000456089 629 ntTSL 3 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 RPL13AP3-202ENST00000494676 1473 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 TBC1D3P6-201ENST00000505954 962 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC132825.4-202ENST00000578792 434 ntBASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS13DQ5THJ4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC008741.2-201ENST00000612792 3115 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AL773545.2-201ENST00000442149 472 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 RNU1-80P-201ENST00000459500 161 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms