Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AC073150.1-201ENST00000450406 1084 ntBASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 RN7SL769P-201ENST00000469386 295 ntBASIC20.01■□□□□ 0.79
CDCA8Q53HL2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 MIR6769A-201ENST00000617340 73 ntBASIC20.01■□□□□ 0.79
CDCA8Q53HL2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA8Q53HL2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 LINC00552-201ENST00000625151 2579 ntBASIC20■□□□□ 0.79
CDCA8Q53HL2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CDCA8Q53HL2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC20■□□□□ 0.79
CDCA8Q53HL2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 UPF3AP2-201ENST00000457924 1132 ntBASIC20■□□□□ 0.79
CDCA8Q53HL2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC242376.1-201ENST00000559033 726 ntBASIC20■□□□□ 0.79
CDCA8Q53HL2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC093752.3-201ENST00000567343 901 ntBASIC20■□□□□ 0.79
CDCA8Q53HL2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20■□□□□ 0.79
CDCA8Q53HL2 MEG3_2.1-201ENST00000611456 105 ntBASIC20■□□□□ 0.79
CDCA8Q53HL2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC20■□□□□ 0.79
CDCA8Q53HL2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CDCA8Q53HL2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDCA8Q53HL2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA8Q53HL2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CDCA8Q53HL2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 AC007274.2-201ENST00000421675 662 ntBASIC19.99■□□□□ 0.79
CDCA8Q53HL2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 LINC01783-202ENST00000614408 828 ntBASIC19.99■□□□□ 0.79
CDCA8Q53HL2 BX284668.2-205ENST00000619677 828 ntBASIC19.99■□□□□ 0.79
CDCA8Q53HL2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms