Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AL645937.2-201ENST00000396808 931 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC107890.1-201ENST00000422478 521 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 KLF2P3-201ENST00000451977 1087 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC125807.1-201ENST00000483097 614 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC109322.1-201ENST00000524499 1264 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 Z92544.3-201ENST00000624747 417 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.21□□□□□ -0.46
ANKRD55Q3KP44 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SALL4P5-201ENST00000419001 1760 ntBASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AL139400.1-201ENST00000366220 510 ntBASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 AC135782.3-201ENST00000562782 2105 ntBASIC12.2□□□□□ -0.46
ANKRD55Q3KP44 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms