Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 REXO1L2P-201ENST00000425429 2069 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 AC007191.1-201ENST00000623179 2995 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13□□□□□ -0.33
NKX6-1P78426 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 AC079178.1-201ENST00000420915 656 ntBASIC13□□□□□ -0.33
NKX6-1P78426 HNRNPA1P63-201ENST00000427917 963 ntBASIC13□□□□□ -0.33
NKX6-1P78426 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 ATP6V0CP2-201ENST00000469409 207 ntBASIC13□□□□□ -0.33
NKX6-1P78426 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13□□□□□ -0.33
NKX6-1P78426 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13□□□□□ -0.33
NKX6-1P78426 AC004466.1-201ENST00000599515 1080 ntBASIC13□□□□□ -0.33
NKX6-1P78426 SPCS2P2-201ENST00000603270 608 ntBASIC13□□□□□ -0.33
NKX6-1P78426 AC097724.1-201ENST00000609581 426 ntBASIC13□□□□□ -0.33
NKX6-1P78426 AC244157.2-201ENST00000616239 1006 ntBASIC13□□□□□ -0.33
NKX6-1P78426 AP001505.2-201ENST00000616815 443 ntBASIC13□□□□□ -0.33
NKX6-1P78426 MIR7845-201ENST00000618396 99 ntBASIC13□□□□□ -0.33
NKX6-1P78426 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
NKX6-1P78426 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX6-1P78426 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-1P78426 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-1P78426 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-1P78426 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-1P78426 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-1P78426 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms