Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CCNA1P78396 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 PSMD4P1-201ENST00000433951 1109 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 RPL35P9-201ENST00000446059 350 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 AC141586.1-203ENST00000567242 366 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 AC007952.4-201ENST00000573866 637 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 RN7SL357P-201ENST00000581065 298 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.46■□□□□ 0.23
CCNA1P78396 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 AC009145.4-201ENST00000625119 1294 ntBASIC16.46■□□□□ 0.23
CCNA1P78396 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCNA1P78396 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
CCNA1P78396 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CCNA1P78396 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCNA1P78396 AGGF1P1-201ENST00000509500 2073 ntBASIC16.46■□□□□ 0.22
CCNA1P78396 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNA1P78396 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNA1P78396 PYY2-201ENST00000315776 282 ntBASIC16.45■□□□□ 0.22
CCNA1P78396 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 GCSHP3-201ENST00000431120 391 ntBASIC16.45■□□□□ 0.22
CCNA1P78396 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNA1P78396 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 LINC00634-202ENST00000505157 222 ntBASIC16.45■□□□□ 0.22
CCNA1P78396 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 AL133467.4-201ENST00000602953 725 ntBASIC16.45■□□□□ 0.22
CCNA1P78396 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.45■□□□□ 0.22
CCNA1P78396 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNA1P78396 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCNA1P78396 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CCNA1P78396 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.45■□□□□ 0.22
CCNA1P78396 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNA1P78396 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNA1P78396 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.44■□□□□ 0.22
CCNA1P78396 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCNA1P78396 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCNA1P78396 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCNA1P78396 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCNA1P78396 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms