Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SNRPFP62306 AC090643.2-201ENST00000623442 2029 ntBASIC15.81■□□□□ 0.12
SNRPFP62306 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SNRPFP62306 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SNRPFP62306 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPFP62306 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 AC139749.1-202ENST00000617529 3139 ntBASIC15.8■□□□□ 0.12
SNRPFP62306 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.8■□□□□ 0.12
SNRPFP62306 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRPFP62306 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRPFP62306 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRPFP62306 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 AC090164.2-201ENST00000611487 516 ntBASIC15.8■□□□□ 0.12
SNRPFP62306 AL008638.5-201ENST00000623814 1298 ntBASIC15.8■□□□□ 0.12
SNRPFP62306 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 AC067750.1-201ENST00000608826 6545 ntBASIC15.8■□□□□ 0.12
SNRPFP62306 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPFP62306 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNRPFP62306 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNRPFP62306 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SNRPFP62306 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 OR2R1P-201ENST00000441404 914 ntBASIC15.79■□□□□ 0.12
SNRPFP62306 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.79■□□□□ 0.12
SNRPFP62306 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.79■□□□□ 0.12
SNRPFP62306 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.79■□□□□ 0.12
SNRPFP62306 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.79■□□□□ 0.12
SNRPFP62306 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.79■□□□□ 0.12
SNRPFP62306 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 AC018629.1-201ENST00000623381 1736 ntBASIC15.79■□□□□ 0.12
SNRPFP62306 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPFP62306 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRPFP62306 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SNRPFP62306 AC018735.1-201ENST00000437208 1502 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms