Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.44□□□□□ -0.1
CDKN2DP55273 RHOXF1P1-202ENST00000635473 501 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDKN2DP55273 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 AL022313.4-201ENST00000562756 2046 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDKN2DP55273 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 SHC1P1-201ENST00000425230 1745 ntBASIC14.44□□□□□ -0.1
CDKN2DP55273 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKN2DP55273 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 TUBB8P4-201ENST00000511806 1324 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKN2DP55273 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKN2DP55273 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 MIR326-201ENST00000362220 95 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKN2DP55273 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKN2DP55273 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.43□□□□□ -0.1
CDKN2DP55273 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDKN2DP55273 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 AC026954.1-201ENST00000429771 1293 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKN2DP55273 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 RPL7P3-201ENST00000441388 714 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 CNN2P10-201ENST00000443067 918 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKN2DP55273 AL355994.2-201ENST00000447882 704 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKN2DP55273 TMEM198B-204ENST00000484016 896 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKN2DP55273 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.43□□□□□ -0.1
CDKN2DP55273 AC005225.4-201ENST00000557330 545 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 AC005586.2-201ENST00000563946 837 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 AC104506.1-201ENST00000609247 429 ntBASIC14.43□□□□□ -0.1
CDKN2DP55273 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.43□□□□□ -0.1
CDKN2DP55273 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKN2DP55273 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKN2DP55273 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.42□□□□□ -0.1
CDKN2DP55273 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDKN2DP55273 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms