Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 DGCR5-201ENST00000399539 862 ntBASIC13□□□□□ -0.33
SLC25A1P53007 AC236430.1-201ENST00000402231 743 ntBASIC13□□□□□ -0.33
SLC25A1P53007 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13□□□□□ -0.33
SLC25A1P53007 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13□□□□□ -0.33
SLC25A1P53007 AL355864.2-201ENST00000447420 863 ntBASIC13□□□□□ -0.33
SLC25A1P53007 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13□□□□□ -0.33
SLC25A1P53007 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13□□□□□ -0.33
SLC25A1P53007 AC106760.1-201ENST00000508690 800 ntBASIC13□□□□□ -0.33
SLC25A1P53007 RNA5SP486-201ENST00000515961 83 ntBASIC13□□□□□ -0.33
SLC25A1P53007 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13□□□□□ -0.33
SLC25A1P53007 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13□□□□□ -0.33
SLC25A1P53007 GNRHR2-203ENST00000581100 1187 ntBASIC13□□□□□ -0.33
SLC25A1P53007 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SLC25A1P53007 ECM1P1-201ENST00000604092 1279 ntBASIC13□□□□□ -0.33
SLC25A1P53007 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
SLC25A1P53007 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 AC111170.3-201ENST00000624282 2464 ntBASIC13□□□□□ -0.33
SLC25A1P53007 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 AL022313.4-201ENST00000562756 2046 ntBASIC13□□□□□ -0.33
SLC25A1P53007 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SLC25A1P53007 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC25A1P53007 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SLC25A1P53007 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 AC126335.2-201ENST00000623362 4637 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC25A1P53007 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC25A1P53007 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SLC25A1P53007 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 CD8B2-202ENST00000417670 633 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.99□□□□□ -0.33
SLC25A1P53007 FAM8A4P-201ENST00000435433 1213 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 AP003171.2-201ENST00000528208 925 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.99□□□□□ -0.33
SLC25A1P53007 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 SPCS2P1-201ENST00000561636 679 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 OR10B1P-201ENST00000601666 907 ntBASIC12.99□□□□□ -0.33
SLC25A1P53007 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC25A1P53007 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC25A1P53007 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC25A1P53007 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SLC25A1P53007 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SLC25A1P53007 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SLC25A1P53007 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SLC25A1P53007 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 AC105206.1-202ENST00000314927 2368 ntBASIC12.98□□□□□ -0.33
SLC25A1P53007 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SLC25A1P53007 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms