Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 AC006504.5-208ENST00000588784 2401 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 AC092978.1-202ENST00000637590 1327 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
EFNA4P52798 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 MIR557-201ENST00000385239 98 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.22□□□□□ -0.45
EFNA4P52798 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.22□□□□□ -0.45
EFNA4P52798 AL807761.2-201ENST00000422849 729 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 AC104784.1-201ENST00000473096 294 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 SIGLEC18P-201ENST00000602271 909 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 AC092171.5-201ENST00000608012 942 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 AL022334.2-201ENST00000610000 484 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.22□□□□□ -0.45
EFNA4P52798 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
EFNA4P52798 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 AC007326.2-201ENST00000624224 7579 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.22□□□□□ -0.45
EFNA4P52798 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 AGAP7P-201ENST00000582299 2062 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 AGAP14-201ENST00000624701 2060 ntBASIC12.22□□□□□ -0.45
EFNA4P52798 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
EFNA4P52798 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.21□□□□□ -0.45
EFNA4P52798 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 KRT8P31-201ENST00000504812 1408 ntBASIC12.21□□□□□ -0.45
EFNA4P52798 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.21□□□□□ -0.45
EFNA4P52798 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.21□□□□□ -0.45
EFNA4P52798 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.21□□□□□ -0.45
EFNA4P52798 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
EFNA4P52798 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
EFNA4P52798 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.21□□□□□ -0.45
EFNA4P52798 AC079112.1-201ENST00000454972 939 ntBASIC12.21□□□□□ -0.45
EFNA4P52798 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.21□□□□□ -0.45
EFNA4P52798 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.21□□□□□ -0.45
EFNA4P52798 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.21□□□□□ -0.45
EFNA4P52798 AP002803.1-201ENST00000528836 498 ntBASIC12.21□□□□□ -0.45
EFNA4P52798 AC140658.4-201ENST00000561990 352 ntBASIC12.21□□□□□ -0.45
EFNA4P52798 RN7SL555P-201ENST00000584742 339 ntBASIC12.21□□□□□ -0.45
EFNA4P52798 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
EFNA4P52798 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.21□□□□□ -0.45
EFNA4P52798 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.21□□□□□ -0.45
EFNA4P52798 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.21□□□□□ -0.45
EFNA4P52798 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms