Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC124068.2-201ENST00000569473 1109 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 MIR4472-1-201ENST00000584349 80 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 AC007326.1-201ENST00000604539 458 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC023908.3-201ENST00000564211 3047 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 KRT17P5-201ENST00000332088 839 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.64□□□□□ -0.39
HCFC1P51610 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 AC006504.5-208ENST00000588784 2401 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 AL390755.1-201ENST00000623716 2027 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 CROCCP1-201ENST00000426910 5675 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.63□□□□□ -0.39
HCFC1P51610 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 MRPL37P1-201ENST00000592451 1337 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.63□□□□□ -0.39
HCFC1P51610 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.63□□□□□ -0.39
HCFC1P51610 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 AL592076.1-201ENST00000424448 303 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.63□□□□□ -0.39
HCFC1P51610 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.63□□□□□ -0.39
HCFC1P51610 AP000911.2-201ENST00000534330 502 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.63□□□□□ -0.39
HCFC1P51610 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 SNX18-202ENST00000343017 3140 ntBASIC12.63□□□□□ -0.39
HCFC1P51610 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.63□□□□□ -0.39
HCFC1P51610 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HCFC1P51610 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.62□□□□□ -0.39
HCFC1P51610 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 OR8T1P-201ENST00000421347 918 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.62□□□□□ -0.39
HCFC1P51610 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms