Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 ACTBP8-201ENST00000403258 1108 ntBASIC15.48■□□□□ 0.07
CHRNA3P32297 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC022616.1-201ENST00000518688 554 ntBASIC15.48■□□□□ 0.07
CHRNA3P32297 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA3P32297 AL603764.1-201ENST00000636452 321 ntBASIC15.48■□□□□ 0.07
CHRNA3P32297 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 SALL4P5-201ENST00000419001 1760 ntBASIC15.48■□□□□ 0.07
CHRNA3P32297 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA3P32297 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA3P32297 AC130686.1-201ENST00000622936 2466 ntBASIC15.48■□□□□ 0.07
CHRNA3P32297 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA3P32297 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.47■□□□□ 0.07
CHRNA3P32297 AC007969.1-201ENST00000433675 447 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 BNIP3P42-201ENST00000454982 569 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 AC026434.2-201ENST00000506094 1078 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.47■□□□□ 0.07
CHRNA3P32297 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.47■□□□□ 0.07
CHRNA3P32297 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 KRT90P-201ENST00000549264 1064 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.47■□□□□ 0.07
CHRNA3P32297 BNIP3P29-201ENST00000598302 571 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 AC011447.5-201ENST00000616168 564 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CHRNA3P32297 AC215219.1-201ENST00000400706 1817 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 CICP16-201ENST00000502609 2813 ntBASIC15.47■□□□□ 0.07
CHRNA3P32297 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRNA3P32297 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRNA3P32297 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRNA3P32297 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.46■□□□□ 0.07
CHRNA3P32297 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms