Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
HOXC8P31273 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 AC021305.1-201ENST00000520656 1514 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC8P31273 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 GNG10P1-201ENST00000452289 199 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.64■□□□□ 0.09
HOXC8P31273 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 AC093909.3-201ENST00000504783 336 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 MIR4265-201ENST00000582152 99 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC8P31273 AP005264.5-201ENST00000590066 467 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC8P31273 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 AC006158.1-201ENST00000610661 249 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC8P31273 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 KRT8P43-201ENST00000406052 1458 ntBASIC15.64■□□□□ 0.09
HOXC8P31273 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.64■□□□□ 0.09
HOXC8P31273 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC8P31273 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 ACTG1P19-201ENST00000418987 1116 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 AQP7P5-201ENST00000428759 1049 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 PSMD4P1-201ENST00000433951 1109 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 AQP7P4-201ENST00000447083 1042 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.63■□□□□ 0.09
HOXC8P31273 GRPEL2P1-201ENST00000453145 339 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 AQP7P2-201ENST00000453967 1041 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 SLC25A15P3-201ENST00000505530 290 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 MIR4472-1-201ENST00000584349 80 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HOXC8P31273 AQP7P3-201ENST00000624547 1041 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.63■□□□□ 0.09
HOXC8P31273 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.63■□□□□ 0.09
HOXC8P31273 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 PDXDC2P-206ENST00000534700 1315 ntBASIC15.63■□□□□ 0.09
HOXC8P31273 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.63■□□□□ 0.09
HOXC8P31273 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms