Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AC107375.1-201ENST00000564464 2231 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AC090505.1-201ENST00000430515 1834 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AP000845.1-201ENST00000581677 2131 ntBASIC14.24□□□□□ -0.13
LINGO3P0C6S8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TSPY16P-201ENST00000449843 468 ntBASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AL589987.1-201ENST00000453380 819 ntBASIC14.24□□□□□ -0.13
LINGO3P0C6S8 KRT18P43-201ENST00000469825 1281 ntBASIC14.24□□□□□ -0.13
LINGO3P0C6S8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINGO3P0C6S8 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 AC102953.2-201ENST00000609755 3026 ntBASIC14.23□□□□□ -0.13
LINGO3P0C6S8 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 MEIS3P1-201ENST00000495167 958 ntBASIC14.23□□□□□ -0.13
LINGO3P0C6S8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.23□□□□□ -0.13
LINGO3P0C6S8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms