Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC175P0C221 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC175P0C221 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC175P0C221 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC175P0C221 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC175P0C221 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC175P0C221 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC175P0C221 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC175P0C221 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC175P0C221 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC175P0C221 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC175P0C221 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC175P0C221 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC175P0C221 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 MEX3B-202ENST00000558133 4333 ntBASIC15.85■□□□□ 0.13
CCDC175P0C221 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC175P0C221 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC175P0C221 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC069120.2-201ENST00000524091 540 ntBASIC15.85■□□□□ 0.13
CCDC175P0C221 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC103988.2-201ENST00000561804 725 ntBASIC15.85■□□□□ 0.13
CCDC175P0C221 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC175P0C221 AL662799.1-202ENST00000614205 422 ntBASIC15.85■□□□□ 0.13
CCDC175P0C221 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC175P0C221 KHSRPP1-201ENST00000427983 1768 ntBASIC15.85■□□□□ 0.13
CCDC175P0C221 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC175P0C221 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC175P0C221 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC175P0C221 AC139712.1-201ENST00000378256 1875 ntBASIC15.84■□□□□ 0.13
CCDC175P0C221 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC175P0C221 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 Z82170.1-201ENST00000625081 3192 ntBASIC15.84■□□□□ 0.13
CCDC175P0C221 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 RPL13AP25-201ENST00000484130 612 ntBASIC15.84■□□□□ 0.13
CCDC175P0C221 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC175P0C221 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.84■□□□□ 0.13
CCDC175P0C221 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC175P0C221 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC175P0C221 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms