Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.15■□□□□ 0.02
CD48P09326 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.15■□□□□ 0.02
CD48P09326 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.15■□□□□ 0.02
CD48P09326 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 AC100850.1-201ENST00000506768 649 ntBASIC15.15■□□□□ 0.02
CD48P09326 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.15■□□□□ 0.02
CD48P09326 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD48P09326 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 RAB43P1-201ENST00000561790 589 ntBASIC15.15■□□□□ 0.02
CD48P09326 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.15■□□□□ 0.02
CD48P09326 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.15■□□□□ 0.02
CD48P09326 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD48P09326 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD48P09326 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD48P09326 KRT8P24-201ENST00000560290 1559 ntBASIC15.15■□□□□ 0.02
CD48P09326 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
CD48P09326 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 AL157996.1-201ENST00000624684 2299 ntBASIC15.14■□□□□ 0.01
CD48P09326 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CD48P09326 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 TCAM1P-207ENST00000485295 1537 ntBASIC15.14■□□□□ 0.01
CD48P09326 TMBIM7P-202ENST00000641474 1516 ntBASIC15.14■□□□□ 0.01
CD48P09326 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 AC005034.1-201ENST00000426657 489 ntBASIC15.14■□□□□ 0.01
CD48P09326 AL161932.2-201ENST00000435436 679 ntBASIC15.14■□□□□ 0.01
CD48P09326 AC234783.1-201ENST00000441761 496 ntBASIC15.14■□□□□ 0.01
CD48P09326 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.14■□□□□ 0.01
CD48P09326 HOMER2P2-201ENST00000451621 847 ntBASIC15.14■□□□□ 0.01
CD48P09326 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.14■□□□□ 0.01
CD48P09326 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 AC008825.2-201ENST00000603374 718 ntBASIC15.14■□□□□ 0.01
CD48P09326 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CD48P09326 AL035252.4-201ENST00000624174 288 ntBASIC15.14■□□□□ 0.01
CD48P09326 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 AC008687.7-202ENST00000637404 953 ntBASIC15.14■□□□□ 0.01
CD48P09326 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.14■□□□□ 0.01
CD48P09326 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.14■□□□□ 0.01
CD48P09326 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 AL023775.1-201ENST00000454907 1746 ntBASIC15.14■□□□□ 0.01
CD48P09326 AC064801.2-201ENST00000625052 1303 ntBASIC15.14■□□□□ 0.01
CD48P09326 AL022313.4-201ENST00000562756 2046 ntBASIC15.14■□□□□ 0.01
CD48P09326 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.14■□□□□ 0.01
CD48P09326 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD48P09326 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.13■□□□□ 0.01
CD48P09326 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.13■□□□□ 0.01
CD48P09326 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD48P09326 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD48P09326 OR2I1P-209ENST00000641730 5365 ntBASIC15.13■□□□□ 0.01
CD48P09326 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.13■□□□□ 0.01
CD48P09326 AC089987.1-201ENST00000551654 2209 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms