Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 SEC63P1-201ENST00000425785 1258 ntBASIC13.51□□□□□ -0.25
THBS1P07996 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 TMEM198B-204ENST00000484016 896 ntBASIC13.51□□□□□ -0.25
THBS1P07996 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 AC006518.1-201ENST00000541449 943 ntBASIC13.51□□□□□ -0.25
THBS1P07996 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 KRT90P-201ENST00000549264 1064 ntBASIC13.51□□□□□ -0.25
THBS1P07996 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 MIR4259-201ENST00000584466 101 ntBASIC13.51□□□□□ -0.25
THBS1P07996 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.51□□□□□ -0.25
THBS1P07996 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
THBS1P07996 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS1P07996 AC138951.2-201ENST00000623455 1161 ntBASIC13.51□□□□□ -0.25
THBS1P07996 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
THBS1P07996 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
THBS1P07996 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.5□□□□□ -0.25
THBS1P07996 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 AL354989.2-201ENST00000435838 1540 ntBASIC13.5□□□□□ -0.25
THBS1P07996 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 TUBB8P4-201ENST00000511806 1324 ntBASIC13.5□□□□□ -0.25
THBS1P07996 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
THBS1P07996 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 MIR658-201ENST00000385210 100 ntBASIC13.5□□□□□ -0.25
THBS1P07996 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 AC022494.1-201ENST00000466044 728 ntBASIC13.5□□□□□ -0.25
THBS1P07996 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 COX5BP1-201ENST00000507622 393 ntBASIC13.5□□□□□ -0.25
THBS1P07996 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.5□□□□□ -0.25
THBS1P07996 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.5□□□□□ -0.25
THBS1P07996 AC005586.2-201ENST00000563946 837 ntBASIC13.5□□□□□ -0.25
THBS1P07996 RN7SL718P-201ENST00000581254 303 ntBASIC13.5□□□□□ -0.25
THBS1P07996 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.5□□□□□ -0.25
THBS1P07996 AC073413.1-201ENST00000603927 732 ntBASIC13.5□□□□□ -0.25
THBS1P07996 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.5□□□□□ -0.25
THBS1P07996 ZACNP1-201ENST00000612259 710 ntBASIC13.5□□□□□ -0.25
THBS1P07996 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.5□□□□□ -0.25
THBS1P07996 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
THBS1P07996 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
THBS1P07996 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms