Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 AC010327.5-201ENST00000586923 3061 ntBASIC15.19■□□□□ 0.02
LRCH4O75427 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LRCH4O75427 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 HLA-V-201ENST00000429037 534 ntBASIC15.19■□□□□ 0.02
LRCH4O75427 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 CSF2RBP1-201ENST00000447905 391 ntBASIC15.19■□□□□ 0.02
LRCH4O75427 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.19■□□□□ 0.02
LRCH4O75427 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.19■□□□□ 0.02
LRCH4O75427 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.19■□□□□ 0.02
LRCH4O75427 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.19■□□□□ 0.02
LRCH4O75427 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.19■□□□□ 0.02
LRCH4O75427 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRCH4O75427 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRCH4O75427 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH4O75427 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LRCH4O75427 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRCH4O75427 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.18■□□□□ 0.02
LRCH4O75427 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.18■□□□□ 0.02
LRCH4O75427 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 AC079178.1-201ENST00000420915 656 ntBASIC15.18■□□□□ 0.02
LRCH4O75427 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH4O75427 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH4O75427 DUX4L45-201ENST00000566406 1057 ntBASIC15.18■□□□□ 0.02
LRCH4O75427 MIR4741-201ENST00000579822 90 ntBASIC15.18■□□□□ 0.02
LRCH4O75427 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.18■□□□□ 0.02
LRCH4O75427 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH4O75427 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH4O75427 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LRCH4O75427 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH4O75427 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH4O75427 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRCH4O75427 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH4O75427 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.17■□□□□ 0.02
LRCH4O75427 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 AL157996.1-201ENST00000624684 2299 ntBASIC15.17■□□□□ 0.02
LRCH4O75427 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRCH4O75427 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRCH4O75427 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH4O75427 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms