Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CTNSO60931 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CTNSO60931 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 AC004899.1-201ENST00000424687 1714 ntBASIC13.71□□□□□ -0.21
CTNSO60931 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CTNSO60931 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CTNSO60931 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.71□□□□□ -0.21
CTNSO60931 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.71□□□□□ -0.21
CTNSO60931 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.71□□□□□ -0.21
CTNSO60931 AC004898.1-201ENST00000451057 766 ntBASIC13.71□□□□□ -0.21
CTNSO60931 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.71□□□□□ -0.21
CTNSO60931 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.71□□□□□ -0.21
CTNSO60931 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 MIR4538-201ENST00000581377 78 ntBASIC13.71□□□□□ -0.21
CTNSO60931 AL022328.3-201ENST00000607943 679 ntBASIC13.71□□□□□ -0.21
CTNSO60931 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 AC004923.1-202ENST00000642106 209 ntBASIC13.71□□□□□ -0.21
CTNSO60931 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.71□□□□□ -0.21
CTNSO60931 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 AC144522.1-201ENST00000625111 1658 ntBASIC13.71□□□□□ -0.21
CTNSO60931 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTNSO60931 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CTNSO60931 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CTNSO60931 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CTNSO60931 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.71□□□□□ -0.22
CTNSO60931 CICP4-201ENST00000447359 2812 ntBASIC13.71□□□□□ -0.22
CTNSO60931 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTNSO60931 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTNSO60931 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.71□□□□□ -0.22
CTNSO60931 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CTNSO60931 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.71□□□□□ -0.22
CTNSO60931 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CTNSO60931 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 BX640514.1-201ENST00000583223 1918 ntBASIC13.7□□□□□ -0.22
CTNSO60931 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 AC018735.1-201ENST00000437208 1502 ntBASIC13.7□□□□□ -0.22
CTNSO60931 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.7□□□□□ -0.22
CTNSO60931 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CTNSO60931 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CTNSO60931 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.7□□□□□ -0.22
CTNSO60931 SERPINA13P-202ENST00000478994 924 ntBASIC13.7□□□□□ -0.22
CTNSO60931 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.7□□□□□ -0.22
CTNSO60931 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 AC008805.1-201ENST00000590892 364 ntBASIC13.7□□□□□ -0.22
CTNSO60931 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.7□□□□□ -0.22
CTNSO60931 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 MIR6799-201ENST00000620297 69 ntBASIC13.7□□□□□ -0.22
CTNSO60931 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.7□□□□□ -0.22
CTNSO60931 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CTNSO60931 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTNSO60931 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.7□□□□□ -0.22
CTNSO60931 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms