Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 OR7E115P-201ENST00000382617 1024 ntBASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC083801.1-201ENST00000491689 358 ntBASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 KRT18P37-201ENST00000520711 1282 ntBASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 AL009176.1-201ENST00000607876 650 ntBASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LOC102724428A0A0B4J2F2 PDXDC2P-206ENST00000534700 1315 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC215219.1-201ENST00000400706 1817 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC007950.2-201ENST00000615045 2347 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC092573.1-201ENST00000433054 884 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 VENTXP4-201ENST00000449029 958 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 PRSS3P1-201ENST00000503996 742 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 EEF1GP8-201ENST00000506566 1154 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 CICP6-201ENST00000457191 2729 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.23■□□□□ 0.51
LOC102724428A0A0B4J2F2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC018529.2-202ENST00000611482 3087 ntBASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 PTGER4P2-201ENST00000328411 252 ntBASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 PTGER4P3-201ENST00000458150 252 ntBASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LOC102724428A0A0B4J2F2 RN7SKP155-201ENST00000516031 288 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms