Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 SPTLC1P5-201ENST00000450718 252 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC245884.6-201ENST00000515672 1067 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC103988.2-201ENST00000561804 725 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 U62317.3-201ENST00000608319 855 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC138649.2-201ENST00000615886 705 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 AC091812.3-201ENST00000621362 345 ntBASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB1Q9Y5F3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 AC139712.1-201ENST00000378256 1875 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 COX5BP1-201ENST00000507622 393 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 MIR4722-201ENST00000578292 60 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PPY2P-201ENST00000582808 702 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 AC244157.2-201ENST00000616239 1006 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 AP001505.2-201ENST00000616815 443 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CU633904.3-201ENST00000624042 1029 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 AC002472.3-201ENST00000640124 621 ntBASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHB1Q9Y5F3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms