Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AL133467.4-201ENST00000602953 725 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AP005117.1-202ENST00000581724 1908 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 CICP11-201ENST00000434745 2827 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 KRT8P2-201ENST00000556193 944 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AL353622.2-201ENST00000605846 425 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.46■□□□□ 0.39
ZC3H4Q9UPT8 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 GEMIN8P4-201ENST00000380526 729 ntBASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 RN7SL288P-201ENST00000490496 291 ntBASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.46■□□□□ 0.38
ZC3H4Q9UPT8 AC020904.3-201ENST00000624199 442 ntBASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms