Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.21■□□□□ 0.02
AP4E1Q9UPM8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 SBF1P1-201ENST00000444527 5631 ntBASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 DUX4L46-201ENST00000566845 751 ntBASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 EEF1DP1-201ENST00000585891 896 ntBASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC239800.4-201ENST00000603712 296 ntBASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 AC020910.6-201ENST00000623084 1459 ntBASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4E1Q9UPM8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 AC136759.1-202ENST00000530858 2194 ntBASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 OR8S1-201ENST00000310194 1080 ntBASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 AC244157.2-201ENST00000616239 1006 ntBASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4E1Q9UPM8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms