Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.06■□□□□ 0.16
L1RE1Q9UN81 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
L1RE1Q9UN81 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
L1RE1Q9UN81 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
L1RE1Q9UN81 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AC011840.2-201ENST00000563063 1520 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 RN7SKP230-201ENST00000365642 335 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 HOMER2P2-201ENST00000451621 847 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 TPT1P11-201ENST00000458482 498 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 FAM86HP-204ENST00000513466 959 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 PPY2P-201ENST00000582808 702 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AC138696.2-201ENST00000607376 223 ntBASIC16.05■□□□□ 0.16
L1RE1Q9UN81 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
L1RE1Q9UN81 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AP000593.2-201ENST00000542775 1433 ntBASIC16.04■□□□□ 0.16
L1RE1Q9UN81 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 FAM86MP-201ENST00000340703 885 ntBASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 AC005562.1-201ENST00000583030 3219 ntBASIC16.04■□□□□ 0.16
L1RE1Q9UN81 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
L1RE1Q9UN81 KRT8P4-201ENST00000509735 1454 ntBASIC16.03■□□□□ 0.16
L1RE1Q9UN81 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
L1RE1Q9UN81 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms