Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.39■□□□□ 0.38
CLIP2Q9UDT6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLIP2Q9UDT6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 GCOM2-201ENST00000509133 1104 ntBASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AC131206.1-201ENST00000538078 1211 ntBASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 BNIP3P13-201ENST00000599968 566 ntBASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AC008825.2-201ENST00000603374 718 ntBASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIP2Q9UDT6 AC004899.1-201ENST00000424687 1714 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AC027601.5-201ENST00000624065 2482 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 DPM3-202ENST00000368399 517 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AC005077.2-201ENST00000449786 690 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 EIF4HP1-201ENST00000453115 687 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AC104073.2-201ENST00000453737 312 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TUBB8P8-201ENST00000458717 1058 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AC005740.2-201ENST00000511085 419 ntBASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIP2Q9UDT6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.37■□□□□ 0.37
CLIP2Q9UDT6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms