Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AC078875.1-201ENST00000431907 724 ntBASIC13.79□□□□□ -0.2
CTSFQ9UBX1 Z97180.1-201ENST00000445173 988 ntBASIC13.79□□□□□ -0.2
CTSFQ9UBX1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AC103988.2-201ENST00000561804 725 ntBASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AL157791.1-201ENST00000553667 1699 ntBASIC13.79□□□□□ -0.2
CTSFQ9UBX1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 RN7SKP214-201ENST00000364208 315 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC024681.1-201ENST00000521917 487 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 MIR3619-201ENST00000579667 83 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC133540.1-201ENST00000620845 1019 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC009093.10-201ENST00000641956 1442 ntBASIC13.78□□□□□ -0.2
CTSFQ9UBX1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSFQ9UBX1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CTSFQ9UBX1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms