Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 TLE1P1-201ENST00000422965 589 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 BX539320.1-201ENST00000623759 877 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 CU634019.7-201ENST00000624153 1185 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 FP236241.2-201ENST00000624906 1185 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AL603764.1-201ENST00000636452 321 ntBASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.25□□□□□ -0.45
LIN7CQ9NUP9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 AP005018.1-201ENST00000525475 301 ntBASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LIN7CQ9NUP9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms