Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 RN7SL665P-201ENST00000578793 300 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 MIR3180-2-201ENST00000581748 88 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AL161773.1-201ENST00000624845 863 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 FLJ16779-201ENST00000612722 7638 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AC025271.4-201ENST00000621477 1726 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 TEKT4P2-202ENST00000559466 1312 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AL354702.1-201ENST00000442006 1960 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC114501.1-201ENST00000445949 172 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC105137.3-201ENST00000617588 984 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC009084.3-201ENST00000623356 437 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC018529.2-202ENST00000611482 3087 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 AC063926.3-201ENST00000624734 5658 ntBASIC16.21■□□□□ 0.19
VTA1Q9NP79 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.21■□□□□ 0.19
VTA1Q9NP79 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VTA1Q9NP79 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.21■□□□□ 0.18
VTA1Q9NP79 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.21■□□□□ 0.18
VTA1Q9NP79 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VTA1Q9NP79 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.2■□□□□ 0.18
VTA1Q9NP79 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VTA1Q9NP79 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VTA1Q9NP79 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VTA1Q9NP79 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTA1Q9NP79 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTA1Q9NP79 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTA1Q9NP79 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VTA1Q9NP79 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.2■□□□□ 0.18
VTA1Q9NP79 AC023157.3-201ENST00000619086 2088 ntBASIC16.2■□□□□ 0.18
VTA1Q9NP79 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VTA1Q9NP79 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms