Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ALG3P1-201ENST00000508806 1114 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 AC131206.1-201ENST00000538078 1211 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ACTG1P17-201ENST00000558391 1119 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 AC132192.2-201ENST00000596206 1147 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 AL136295.7-201ENST00000619226 1200 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 AC004923.1-202ENST00000642106 209 ntBASIC16.16■□□□□ 0.18
TRIM6Q9C030 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM6Q9C030 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AC005077.2-201ENST00000449786 690 ntBASIC16.15■□□□□ 0.18
TRIM6Q9C030 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 GCOM2-201ENST00000509133 1104 ntBASIC16.15■□□□□ 0.18
TRIM6Q9C030 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 BNIP3P13-201ENST00000599968 566 ntBASIC16.15■□□□□ 0.18
TRIM6Q9C030 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 AGAP7P-201ENST00000582299 2062 ntBASIC16.15■□□□□ 0.18
TRIM6Q9C030 AGAP14-201ENST00000624701 2060 ntBASIC16.15■□□□□ 0.18
TRIM6Q9C030 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM6Q9C030 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM6Q9C030 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM6Q9C030 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM6Q9C030 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.14■□□□□ 0.17
TRIM6Q9C030 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 LINC01101-201ENST00000622953 1884 ntBASIC16.14■□□□□ 0.17
TRIM6Q9C030 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM6Q9C030 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM6Q9C030 PUDPP3-201ENST00000445368 636 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms