Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SHC3Q92529 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHC3Q92529 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC3Q92529 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC3Q92529 ST13P19-201ENST00000442505 1124 ntBASIC15.56■□□□□ 0.08
SHC3Q92529 YBX1P6-201ENST00000442962 1002 ntBASIC15.56■□□□□ 0.08
SHC3Q92529 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.56■□□□□ 0.08
SHC3Q92529 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC3Q92529 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.56■□□□□ 0.08
SHC3Q92529 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.56■□□□□ 0.08
SHC3Q92529 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SHC3Q92529 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.56■□□□□ 0.08
SHC3Q92529 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 COX11-210ENST00000639671 696 ntBASIC15.56■□□□□ 0.08
SHC3Q92529 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.56■□□□□ 0.08
SHC3Q92529 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.56■□□□□ 0.08
SHC3Q92529 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHC3Q92529 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.55■□□□□ 0.08
SHC3Q92529 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.55■□□□□ 0.08
SHC3Q92529 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
SHC3Q92529 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 MIR4259-201ENST00000584466 101 ntBASIC15.55■□□□□ 0.08
SHC3Q92529 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SHC3Q92529 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SHC3Q92529 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHC3Q92529 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.55■□□□□ 0.08
SHC3Q92529 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SHC3Q92529 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 FAM58BP-201ENST00000439056 645 ntBASIC15.54■□□□□ 0.08
SHC3Q92529 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.54■□□□□ 0.08
SHC3Q92529 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms