Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 BIN3-212ENST00000640731 450 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 FAM90A27P-201ENST00000593323 1370 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 FAM90A28P-202ENST00000597191 1374 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 CACYBPP3-201ENST00000406011 625 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 RN7SL322P-201ENST00000583519 299 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MIR1307-201ENST00000408840 149 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 RPL13AP5-201ENST00000439189 612 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 SNORA47-201ENST00000458862 138 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 RN7SL134P-201ENST00000579756 303 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MIR4526-201ENST00000583168 87 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 AL109983.1-201ENST00000603234 646 ntBASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTBP4Q8N2S1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 HMGN1P4-201ENST00000419500 290 ntBASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 MIR378I-201ENST00000582688 76 ntBASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 CALM3-206ENST00000594523 540 ntTSL 4 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 KRT8P25-201ENST00000473150 1456 ntBASIC19.27■□□□□ 0.68
LTBP4Q8N2S1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LTBP4Q8N2S1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.27■□□□□ 0.67
LTBP4Q8N2S1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LTBP4Q8N2S1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
LTBP4Q8N2S1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 AC103592.1-201ENST00000394513 664 ntBASIC19.26■□□□□ 0.67
LTBP4Q8N2S1 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms