Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AC005730.2-201ENST00000564549 1184 ntBASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AC020914.3-201ENST00000594712 304 ntBASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AL136172.1-201ENST00000598590 1394 ntBASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AC106794.1-201ENST00000506935 792 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 GCOM2-201ENST00000509133 1104 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 DUX4L46-201ENST00000566845 751 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AC008825.2-201ENST00000603374 718 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 AL133338.1-201ENST00000565695 1517 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 LINC01101-201ENST00000622953 1884 ntBASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM48Q8IWZ4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms