Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRTM1Q86UE6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 RN7SKP230-201ENST00000365642 335 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AP001582.1-201ENST00000525856 295 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 SNHG9-202ENST00000564014 471 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC120045.2-201ENST00000567334 178 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC008738.7-201ENST00000609744 511 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC004790.1-201ENST00000612686 536 ntBASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRTM1Q86UE6 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 AC241585.1-201ENST00000433527 519 ntBASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LRRTM1Q86UE6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms