Protein–RNA interactions for Protein: Q3SY05

LINC00303, Putative uncharacterized protein encoded by LINC00303, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00303Q3SY05 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 INE2-201ENST00000630399 1874 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 C18orf15-201ENST00000623680 2534 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AL512430.1-201ENST00000392575 860 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC010234.1-201ENST00000494599 870 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SCARNA21-201ENST00000517026 139 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 MIR3677-201ENST00000578964 60 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 RPL17P45-201ENST00000586289 509 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AL109837.1-201ENST00000603272 613 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC007881.3-201ENST00000608897 607 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AGAP7P-201ENST00000582299 2062 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AC009093.2-202ENST00000620513 2079 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 AGAP14-201ENST00000624701 2060 ntBASIC13.78□□□□□ -0.2
LINC00303Q3SY05 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00303Q3SY05 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.77□□□□□ -0.2
LINC00303Q3SY05 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.77□□□□□ -0.2
LINC00303Q3SY05 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00303Q3SY05 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AC026320.2-201ENST00000434379 478 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AC012441.2-201ENST00000444843 739 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AC130709.1-201ENST00000484779 1212 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AC008723.1-201ENST00000506922 207 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AC005840.4-201ENST00000541242 2494 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 AL008718.2-201ENST00000609206 1313 ntBASIC13.77□□□□□ -0.21
LINC00303Q3SY05 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00303Q3SY05 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms