Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 ST20-AS1-201ENST00000560255 4223 ntBASIC10.91□□□□□ -0.66
CMC4P56277 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CMC4P56277 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.91□□□□□ -0.66
CMC4P56277 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 AL157407.1-201ENST00000435784 904 ntBASIC10.91□□□□□ -0.66
CMC4P56277 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.91□□□□□ -0.66
CMC4P56277 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.91□□□□□ -0.66
CMC4P56277 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.91□□□□□ -0.66
CMC4P56277 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 AC005324.6-201ENST00000587972 613 ntBASIC10.91□□□□□ -0.66
CMC4P56277 AC021016.3-201ENST00000608367 477 ntBASIC10.91□□□□□ -0.66
CMC4P56277 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 AC133540.1-201ENST00000620845 1019 ntBASIC10.91□□□□□ -0.66
CMC4P56277 AL591471.1-201ENST00000621855 229 ntBASIC10.91□□□□□ -0.66
CMC4P56277 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.91□□□□□ -0.66
CMC4P56277 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CMC4P56277 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CMC4P56277 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.9□□□□□ -0.66
CMC4P56277 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms