Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CENPAP49450 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CENPAP49450 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.42□□□□□ -0.26
CENPAP49450 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CENPAP49450 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CENPAP49450 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CENPAP49450 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
CENPAP49450 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 AC092117.1-201ENST00000621230 3250 ntBASIC13.41□□□□□ -0.26
CENPAP49450 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 SOCS2P1-201ENST00000417727 557 ntBASIC13.41□□□□□ -0.26
CENPAP49450 AC114812.1-204ENST00000449669 728 ntBASIC13.41□□□□□ -0.26
CENPAP49450 AC092183.1-201ENST00000469884 875 ntBASIC13.41□□□□□ -0.26
CENPAP49450 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 AC123567.1-201ENST00000548294 1261 ntBASIC13.41□□□□□ -0.26
CENPAP49450 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.41□□□□□ -0.26
CENPAP49450 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 AC009118.2-201ENST00000613275 655 ntBASIC13.41□□□□□ -0.26
CENPAP49450 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.41□□□□□ -0.26
CENPAP49450 AC007541.1-201ENST00000570282 1469 ntBASIC13.41□□□□□ -0.26
CENPAP49450 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CENPAP49450 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.41□□□□□ -0.26
CENPAP49450 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CENPAP49450 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CENPAP49450 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 KRT8P14-201ENST00000414254 1442 ntBASIC13.4□□□□□ -0.26
CENPAP49450 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms