Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
KRT6CP48668 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KRT6CP48668 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 MSTO2P-201ENST00000314835 1709 ntBASIC14.27□□□□□ -0.12
KRT6CP48668 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
KRT6CP48668 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.27□□□□□ -0.12
KRT6CP48668 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.27□□□□□ -0.12
KRT6CP48668 TCAM1P-207ENST00000485295 1537 ntBASIC14.27□□□□□ -0.12
KRT6CP48668 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
KRT6CP48668 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT6CP48668 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
KRT6CP48668 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KRT6CP48668 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT6CP48668 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6CP48668 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT6CP48668 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 AC103988.2-201ENST00000561804 725 ntBASIC14.27□□□□□ -0.13
KRT6CP48668 MIR5189-201ENST00000577370 114 ntBASIC14.27□□□□□ -0.13
KRT6CP48668 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.27□□□□□ -0.13
KRT6CP48668 BX088702.1-201ENST00000610784 235 ntBASIC14.27□□□□□ -0.13
KRT6CP48668 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KRT6CP48668 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KRT6CP48668 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
KRT6CP48668 AC139712.1-201ENST00000378256 1875 ntBASIC14.27□□□□□ -0.13
KRT6CP48668 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT6CP48668 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT6CP48668 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KRT6CP48668 MST1P2-201ENST00000457982 2291 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT6CP48668 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 TPM3P8-201ENST00000330554 643 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
KRT6CP48668 AP006294.1-201ENST00000415407 339 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT6CP48668 ALG3P1-201ENST00000508806 1114 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT6CP48668 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT6CP48668 AC010319.3-201ENST00000597028 470 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 AP001002.3-201ENST00000623482 206 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT6CP48668 AC020910.5-201ENST00000623668 1865 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
KRT6CP48668 AL356585.2-201ENST00000625078 2396 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT6CP48668 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 AC012617.1-204ENST00000586340 2305 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 AL138709.1-201ENST00000614840 1693 ntBASIC14.26□□□□□ -0.13
KRT6CP48668 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT6CP48668 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KRT6CP48668 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT6CP48668 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms