Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.09□□□□□ -0.31
HOXC12P31275 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.09□□□□□ -0.31
HOXC12P31275 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.09□□□□□ -0.31
HOXC12P31275 POM121L10P-201ENST00000436994 1285 ntBASIC13.09□□□□□ -0.31
HOXC12P31275 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 AP000593.2-201ENST00000542775 1433 ntBASIC13.09□□□□□ -0.31
HOXC12P31275 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.09□□□□□ -0.31
HOXC12P31275 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.09□□□□□ -0.31
HOXC12P31275 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 SPCS2P2-201ENST00000603270 608 ntBASIC13.09□□□□□ -0.31
HOXC12P31275 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.09□□□□□ -0.31
HOXC12P31275 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.09□□□□□ -0.31
HOXC12P31275 AC023090.2-201ENST00000625182 2110 ntBASIC13.09□□□□□ -0.31
HOXC12P31275 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HOXC12P31275 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HOXC12P31275 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
HOXC12P31275 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.09□□□□□ -0.31
HOXC12P31275 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.08□□□□□ -0.31
HOXC12P31275 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 AC018735.1-201ENST00000437208 1502 ntBASIC13.08□□□□□ -0.31
HOXC12P31275 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HOXC12P31275 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HOXC12P31275 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HOXC12P31275 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.08□□□□□ -0.32
HOXC12P31275 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.08□□□□□ -0.32
HOXC12P31275 LDHBP1-201ENST00000455730 1119 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 AC126915.1-201ENST00000522847 1038 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 AC004466.1-201ENST00000599515 1080 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 AC138696.2-201ENST00000607376 223 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 U62317.3-201ENST00000608319 855 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
HOXC12P31275 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 AC128714.1-201ENST00000637035 887 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 AC002472.3-201ENST00000640124 621 ntBASIC13.08□□□□□ -0.32
HOXC12P31275 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.08□□□□□ -0.32
HOXC12P31275 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HOXC12P31275 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HOXC12P31275 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms