Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 AL023775.1-201ENST00000454907 1746 ntBASIC12.6□□□□□ -0.39
TNFSF4P23510 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TNFSF4P23510 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 HIST2H2BB-201ENST00000449108 381 ntBASIC12.6□□□□□ -0.39
TNFSF4P23510 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TNFSF4P23510 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.6□□□□□ -0.39
TNFSF4P23510 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AL583810.1-201ENST00000553344 1045 ntBASIC12.6□□□□□ -0.39
TNFSF4P23510 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.6□□□□□ -0.39
TNFSF4P23510 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 MIR4683-201ENST00000579659 81 ntBASIC12.6□□□□□ -0.39
TNFSF4P23510 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TNFSF4P23510 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TNFSF4P23510 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 INE2-201ENST00000630399 1874 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.59□□□□□ -0.39
TNFSF4P23510 FAM58BP-201ENST00000439056 645 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 CHMP1AP1-201ENST00000445563 662 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.59□□□□□ -0.39
TNFSF4P23510 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.59□□□□□ -0.39
TNFSF4P23510 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.59□□□□□ -0.39
TNFSF4P23510 RN7SL219P-201ENST00000582872 296 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.59□□□□□ -0.39
TNFSF4P23510 AC091271.1-201ENST00000611877 1162 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms